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meta_example_cellinker.txt

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count_example_cellinker.txt

Notes

Meta file: scRNA-seq meta data containing cell index with its cell type. Format accepted: .txt / .zip (tab separated), see Help for details.

Counts file: scRNA-seq count data containing gene expression values where rows are gene symbols and columns are cells. Format accepted: .txt / .zip (tab separated), see Help for details.

Minimum ratio of gene expressed in a cell type: For filter out the genes expressed lower than threshold in a cell type.

P-Value: The threshold of the permutation test.

Number of statistical iterations (max 1000): The number of statistical iterations of the permutation test.

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Contact Yang Zhang byzhy1001@alu.uestc.edu.cn/yangzhang@cdutcm.edu.cn
© Department of Bioinformatics

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