MRCLinkdb M
MRCLinkdb
Download
Metabolite-Gene interaction Data
Files Name Description Download
Homo sapiens metabolite L-R interaction Homo sapiens metabolite L-R interaction and annotations. txt
Mus musculus metabolite L-R interaction Mus musculus metabolite L-R interaction and annotations. txt
Metabolite-Cell interaction Data
Files Name Description Download
Metabolite-cell interaction Metabolite and cell interaction and annotations. txt
Enzyme and Transporter Protein
Files Name Description Download
Homo sapiens enzyme Homo sapiens enzyme involved in metabolite ligands txt
Homo sapiens transporter protein Homo sapiens transporter proteins involved in metabolite ligands txt
Mus musculus enzyme Mus musculus enzyme involved in metabolite ligands txt
Mus musculus transporter protein Mus musculus transporter proteins involved in metabolite ligands txt
Script of predicting metabolite-ligand-receptor interactions
Files Name Description Download
Webservice_mrp Predicting metabolite-ligand-receptor interactions R
API

URL Form

http://www.cellknowledge.com.cn/cellinker/mysql_php/api.php?keyword=**&species=**

  • keyword = The Symbol that the user wants to search
  • species = The specific species that the user wants to limit

Specification of Tag Values

  • For " keyword " tag:
Valid Values Note
AR keyword limit to 'AR', Gene Symbol
367 keyword limit to '367', Entrez ID
P10275 keyword limit to 'P10275', Uniprot ID
Serotonin keyword limit to 'Serotonin', Metabolite Name
HMDB0000259 keyword limit to 'HMDB0000259', Metabolite of HMDB ID
5202 keyword limit to '5202', Metabolite of PubChem CID
135651413 keyword limit to '135651413', Metabolite of PubChem SID
  • For " species " tag:
Valid Values Note
Homo sapiens species limit to "Homo sapiens"
Mus musculus species limit to "Mus musculus"
all don't limit species

Example

Contact Yang Zhang byzhy1001@alu.uestc.edu.cn/yangzhang@cdutcm.edu.cn
© Department of Bioinformatics